STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102355454UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4. (310 aa)    
Predicted Functional Partners:
B3GNT3
Hexosyltransferase.
   
 
 0.941
FUT9
Fucosyltransferase 9.
     
 0.925
ST3GAL6
ST3 beta-galactoside alpha-2,3-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
     
 0.923
LOC102363620
Glyco_tran_10_N domain-containing protein.
     
 0.921
B3GNT5
Hexosyltransferase.
   
 
 0.917
B3GNT4
Hexosyltransferase.
   
 
 0.916
LOC102349667
Hexosyltransferase.
   
 
 0.911
B3GALT1
Hexosyltransferase.
   
 
 0.911
LOC102347363
Hexosyltransferase.
   
 
 0.911
B3GALT5
Hexosyltransferase.
   
 
 0.911
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.