STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102362949Uncharacterized protein. (1612 aa)    
Predicted Functional Partners:
LOC102360596
Uncharacterized protein.
 
     0.929
FANCM
FA complementation group M.
    
 0.664
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.655
LOC102361814
Tudor domain-containing protein.
    
 0.642
POLD1
DNA polymerase.
   
 0.624
LSM10
LSM10, U7 small nuclear RNA associated.
    
 0.605
MUS81
Uncharacterized protein.
    
 0.583
SNRPD2
Small nuclear ribonucleoprotein Sm D2.
    
 0.576
CRAMP1
Cramped chromatin regulator homolog 1.
   
 
 0.572
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.562
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.