STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XRCC2-2THAP-type domain-containing protein. (477 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.846
H2ZWQ9_LATCH
WD_REPEATS_REGION domain-containing protein.
    
 0.636
CDC73
Cell division cycle 73.
    
 0.603
CDC16
Cell division cycle 16.
    
 0.597
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.591
ANAPC1
Anaphase promoting complex subunit 1.
    
 0.586
ANAPC5
Anaphase promoting complex subunit 5.
   
 0.574
ANAPC2
Anaphase promoting complex subunit 2; Belongs to the cullin family.
   
 0.550
ANAPC16
Anaphase promoting complex subunit 16.
    
  0.529
KIF5C
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.523
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.