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ENSLACG00000002143 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000002143" - Rap1 GTPase-activating protein 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000002143Rap1 GTPase-activating protein 1 (647 aa)    
Predicted Functional Partners:
RAP1A
RAP1A, member of RAS oncogene family (185 aa)
     
  0.932
RAP1B
RAP1B, member of RAS oncogene family (184 aa)
     
  0.932
RAD54B
RAD54 homolog B (S. cerevisiae) (2005 aa)
     
  0.640
ENSLACG00000015177
Uncharacterized protein (729 aa)
     
  0.593
PRKG1
Protein kinase, cGMP-dependent, type I (330 aa)
     
  0.593
RAPGEF4
Rap guanine nucleotide exchange factor (GEF) 4 (750 aa)
     
 
  0.589
RAPGEF3
Rap guanine nucleotide exchange factor (GEF) 3 (376 aa)
     
 
  0.587
PRKACB
Protein kinase, cAMP-dependent, catalytic, beta (351 aa)
     
  0.585
ENSLACG00000006846
Uncharacterized protein (351 aa)
     
  0.585
RET
Ret proto-oncogene (1090 aa)
       
  0.577
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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