STRINGSTRING
ENSLACG00000002150 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000002150" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000002150Uncharacterized protein (818 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12 (2023 aa)
     
  0.679
UBA52
Uncharacterized protein (128 aa)
     
  0.644
USP13
Ubiquitin specific peptidase 13 (isopeptidase T-3) (863 aa)
     
 
  0.580
USP5
Ubiquitin specific peptidase 5 (isopeptidase T) (835 aa)
     
 
  0.580
KXD1
Ubiquitin A-52 residue ribosomal protein fusion product 1 (231 aa)
     
  0.569
USP28
Ubiquitin specific peptidase 28 (1060 aa)
     
 
  0.558
USP25
Ubiquitin specific peptidase 25 (1110 aa)
     
 
  0.558
C9orf78
Chromosome 9 open reading frame 78 (287 aa)
           
  0.540
USP10
Ubiquitin specific peptidase 10 (752 aa)
     
  0.498
HACE1
HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 (916 aa)
     
  0.490
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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