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SERPINF1 protein (Latimeria chalumnae) - STRING interaction network
"SERPINF1" - Serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 in Latimeria chalumnae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINF1Serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 (420 aa)    
Predicted Functional Partners:
LRP5
Low density lipoprotein receptor-related protein 5 (1598 aa)
       
  0.817
LRP6
Low density lipoprotein receptor-related protein 6 (1615 aa)
       
  0.817
HABP2
Hyaluronan binding protein 2 (480 aa)
   
  0.701
LEPRE1
Leucine proline-enriched proteoglycan (leprecan) 1 (647 aa)
     
  0.613
COL6A3
Collagen, type VI, alpha 3 (3169 aa)
     
  0.611
F2
Coagulation factor II (thrombin); Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing (618 aa)
   
  0.606
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 (3259 aa)
       
  0.605
COL28A1
Collagen, type XXVIII, alpha 1 (1220 aa)
       
  0.605
COL6A5
Uncharacterized protein (1554 aa)
       
  0.605
TRIO
Trio Rho guanine nucleotide exchange factor (3035 aa)
         
  0.576
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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