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STRINGSTRING
SERPINF1 protein (Latimeria chalumnae) - STRING interaction network
"SERPINF1" - Serpin family F member 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINF1Serpin family F member 1; Serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 (420 aa)    
Predicted Functional Partners:
LRP5
Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor- ligand complexes into ribosome-sized signalsomes (1598 aa)
       
  0.921
LRP6
Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor- ligand complexes into ribosome-sized signalsomes (1615 aa)
       
  0.855
TMEM38B
Transmembrane protein 38B (302 aa)
     
   
  0.776
LEPRE1
Prolyl 3-hydroxylase 1; Leucine proline-enriched proteoglycan (leprecan) 1 (647 aa)
     
 
  0.724
VEGFA
Vascular endothelial growth factor A (189 aa)
     
   
  0.707
CRTAP
Cartilage associated protein (422 aa)
     
 
  0.705
COL1A1
Collagen, type I, alpha 1 (1486 aa)
     
 
  0.699
FKBP10
Peptidylprolyl isomerase; FK506 binding protein 10, 65 kDa (450 aa)
     
 
  0.695
PLS3
Plastin 3 (630 aa)
     
 
  0.694
PLOD2
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 (737 aa)
     
   
  0.620
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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