STRINGSTRING
FKRP protein (Latimeria chalumnae) - STRING interaction network
"FKRP" - Fukutin related protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKRPFukutin related protein (507 aa)    
Predicted Functional Partners:
POMT2
protein-O-mannosyltransferase 2 (720 aa)
     
   
  0.614
POMT1
protein-O-mannosyltransferase 1 (747 aa)
     
   
  0.602
ISPD
Isoprenoid synthase domain containing (322 aa)
           
  0.561
TMEM5
Transmembrane protein 5 (449 aa)
     
   
  0.531
CRYBA1
Crystallin, beta A1 (199 aa)
           
  0.503
DAG1
Dystroglycan 1 (dystrophin-associated glycoprotein 1) (900 aa)
           
  0.493
ENSLACG00000012455
Uncharacterized protein (211 aa)
           
  0.493
CRYBB1
Crystallin, beta B1 (254 aa)
           
  0.493
ENSLACG00000003067
Uncharacterized protein (219 aa)
           
  0.493
FLII
Flightless I homolog (Drosophila) (1259 aa)
     
        0.451
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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