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TMEM55A protein (Latimeria chalumnae) - STRING interaction network
"TMEM55A" - Transmembrane protein 55A in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM55ATransmembrane protein 55A (257 aa)    
Predicted Functional Partners:
MTMR1
Myotubularin related protein 1 (669 aa)
     
 
    0.905
MTM1
Myotubularin 1 (600 aa)
     
 
    0.905
MTMR2
Myotubularin related protein 2 (711 aa)
     
 
    0.905
MTMR6
Myotubularin related protein 6 (623 aa)
     
 
    0.902
MTMR7
Myotubularin related protein 7 (661 aa)
     
 
    0.902
SYNJ2
Synaptojanin 2 (1075 aa)
     
 
    0.901
SYNJ1
Synaptojanin 1 (1563 aa)
     
 
    0.901
MTMR3
Myotubularin related protein 3 (1222 aa)
     
 
    0.901
ASB12
Ankyrin repeat and SOCS box containing 12 (690 aa)
     
 
    0.901
PIK3CA
Phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha (1069 aa)
     
 
    0.901
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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