Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR90WD repeat domain 90. (1846 aa)    
Predicted Functional Partners:
RHOT2
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
 
 
 0.964
LOC102354290
Uncharacterized protein.
   
 0.956
ENKUR
Enkurin, TRPC channel interacting protein.
    
 
 0.954
DNALI1
Dynein axonemal light intermediate chain 1.
    
 
 0.939
CCDC113
Coiled-coil domain containing 113.
    
 
 0.937
CFAP43
Cilia and flagella associated protein 43.
    
 
 0.928
CCDC65
Coiled-coil domain containing 65.
    
 
 0.927
EFHB
EF-hand domain family member B.
    
   0.923
FAM183A
Family with sequence similarity 183 member A.
    
   0.919
IQCD
IQ motif containing D.
    
 
 0.915
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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