STRINGSTRING
WDR90 protein (Latimeria chalumnae) - STRING interaction network
"WDR90" - WD repeat domain 90 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR90WD repeat domain 90 (1846 aa)    
Predicted Functional Partners:
KDM6B
Lysine (K)-specific demethylase 6B (1638 aa)
     
  0.946
KDM6A
Lysine (K)-specific demethylase 6A (1452 aa)
     
  0.946
KATNAL2
Katanin p60 subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays (542 aa)
     
 
  0.935
KATNAL1
Katanin p60 subunit A-like 1 (372 aa)
     
 
  0.935
ASH2L
Ash2 (absent, small, or homeotic)-like (Drosophila) (448 aa)
     
  0.918
RBBP5
Retinoblastoma binding protein 5 (494 aa)
     
  0.904
SETD1B
SET domain containing 1B (1979 aa)
     
  0.893
SETD1A
SET domain containing 1A (1677 aa)
     
  0.893
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase (1048 aa)
     
  0.837
BPTF
Bromodomain PHD finger transcription factor (3013 aa)
     
 
  0.834
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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