STRINGSTRING
ENSLACG00000002180 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000002180" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000002180Uncharacterized protein (145 aa)    
Predicted Functional Partners:
ENSLACG00000009499
Uncharacterized protein (634 aa)
 
0.564
CHD5
Chromodomain helicase DNA binding protein 5 (691 aa)
       
  0.553
CHD3
Chromodomain helicase DNA binding protein 3 (1975 aa)
       
  0.553
CHD7
Chromodomain helicase DNA binding protein 7 (3000 aa)
       
  0.553
ABCG2
ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group) (607 aa)
 
0.553
ABCB1
Multidrug resistance protein 1 (1161 aa)
     
 
  0.525
ABCB5
ATP-binding cassette, sub-family B (MDR/TAP), member 5 (1243 aa)
     
 
  0.525
ABCB11
ATP-binding cassette, sub-family B (MDR/TAP), member 11 (594 aa)
     
 
  0.525
TOP2A
Topoisomerase (DNA) II alpha 170kDa; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1569 aa)
         
  0.513
TOP2B
Topoisomerase (DNA) II beta 180kDa; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1615 aa)
         
  0.513
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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