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STRINGSTRING
RFK protein (Latimeria chalumnae) - STRING interaction network
"RFK" - Riboflavin kinase in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFKRiboflavin kinase (155 aa)    
Predicted Functional Partners:
FLAD1
Flavin adenine dinucleotide synthetase 1 (523 aa)
   
  0.983
ENPP3
Ectonucleotide pyrophosphatase/phosphodiesterase 3 (721 aa)
       
  0.905
BLVRB
Biliverdin reductase B (flavin reductase (NADPH)) (211 aa)
         
    0.900
ACP5
Acid phosphatase 5, tartrate resistant (329 aa)
   
 
  0.835
ACP2
Acid phosphatase 2, lysosomal; Belongs to the histidine acid phosphatase family (438 aa)
     
 
  0.805
ACP1
Acid phosphatase 1, soluble (173 aa)
   
 
    0.804
HDHD1
Pseudouridine 5’-phosphatase; Haloacid dehalogenase-like hydrolase domain containing 1 (231 aa)
 
   
  0.778
YKT6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family (199 aa)
       
      0.771
UFM1
Uncharacterized protein; Ubiquitin-fold modifier 1 (74 aa)
       
      0.742
TNFRSF1A
Uncharacterized protein; Tumor necrosis factor receptor superfamily, member 1A (163 aa)
       
 
  0.715
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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