Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RFKRiboflavin kinase. (155 aa)    
Predicted Functional Partners:
FLAD1
Flavin adenine dinucleotide synthetase 1.
    
 0.996
ACP5
Tartrate-resistant acid phosphatase type 5.
  
 
 0.916
ACP1
LMWPc domain-containing protein.
    
  0.908
BLVRB
Biliverdin reductase B.
    
 0.907
ENPP3
Ectonucleotide pyrophosphatase/phosphodiesterase 3.
     
 0.900
ENPP1
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
     
 0.900
ACP2
Acid phosphatase 2, lysosomal; Belongs to the histidine acid phosphatase family.
     
  0.900
IYD
Iodotyrosine deiodinase.
    
 0.878
LOC102356355
TNFR-Cys domain-containing protein.
    
 
 0.796
AMACR
Alpha-methylacyl-CoA racemase.
   
 
  0.768
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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