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CHAF1A protein (Latimeria chalumnae) - STRING interaction network
"CHAF1A" - Chromatin assembly factor 1, subunit A in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHAF1AChromatin assembly factor 1, subunit A (p150) (970 aa)    
Predicted Functional Partners:
CHAF1B
Chromatin assembly factor 1, subunit B (p60) (500 aa)
     
  0.836
ASF1A
ASF1 anti-silencing function 1 homolog A (S. cerevisiae) (204 aa)
     
 
  0.633
ASF1B
ASF1 anti-silencing function 1 homolog B (S. cerevisiae) (201 aa)
     
 
  0.633
RPA3
Replication protein A3, 14kDa (121 aa)
           
  0.576
MCM5
Minichromosome maintenance complex component 5 (635 aa)
     
   
  0.560
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
     
 
  0.534
NEIL3
Nei endonuclease VIII-like 3 (E. coli) (383 aa)
     
   
  0.526
DCLRE1B
DNA cross-link repair 1B (369 aa)
           
  0.526
TOP2A
Topoisomerase (DNA) II alpha 170kDa; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1569 aa)
     
 
  0.473
TOP2B
Topoisomerase (DNA) II beta 180kDa; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1615 aa)
     
 
  0.473
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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