STRINGSTRING
TAT protein (Latimeria chalumnae) - STRING interaction network
"TAT" - Tyrosine aminotransferase in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TATTyrosine aminotransferase (183 aa)    
Predicted Functional Partners:
HPD
4-hydroxyphenylpyruvate dioxygenase (395 aa)
     
 
  0.970
MAT2A
Methionine adenosyltransferase II, alpha; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (391 aa)
   
 
  0.935
MAT1A
Methionine adenosyltransferase I, alpha; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (391 aa)
   
 
  0.935
ADI1
Acireductone dioxygenase 1; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene) (179 aa)
   
 
  0.929
PAH
Phenylalanine hydroxylase (335 aa)
     
 
  0.914
ENSLACG00000012178
Uncharacterized protein (425 aa)
     
 
  0.912
TH
Tyrosine hydroxylase (247 aa)
     
 
  0.912
DDC
Dopa decarboxylase (aromatic L-amino acid decarboxylase) (503 aa)
   
 
  0.910
ENSLACG00000010232
Uncharacterized protein (301 aa)
     
 
  0.909
MTR
5-methyltetrahydrofolate-homocysteine methyltransferase (1252 aa)
     
 
  0.904
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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