STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIGLPhosphatidylinositol glycan anchor biosynthesis class L. (274 aa)    
Predicted Functional Partners:
AMDHD2
N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
    
 0.955
CARS2
Cysteinyl-tRNA synthetase 2, mitochondrial.
  
 
 0.946
CARS1
Cysteinyl-tRNA synthetase.
  
 
 0.945
SENP8
SUMO peptidase family member, NEDD8 specific.
    
 0.942
PIGN
Phosphatidylinositol glycan anchor biosynthesis class N.
      
 0.931
PIGH
Phosphatidylinositol glycan anchor biosynthesis class H.
   
  
 0.925
PIGG
Phosphatidylinositol glycan anchor biosynthesis class G.
      
 0.919
PIGM
GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly.
     
 0.912
PIGB
Mannosyltransferase.
   
  
 0.899
TTF2
Uncharacterized protein.
    
  0.882
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.