STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZYM4_LATCHUncharacterized protein. (990 aa)    
Predicted Functional Partners:
IPO8
Importin 8.
    
 
 0.596
GTF3C2
General transcription factor IIIC, polypeptide 2, beta.
    
 0.592
PSPC1
Paraspeckle component 1.
    
 
 0.576
SFPQ
Splicing factor proline and glutamine rich.
    
 
 0.510
NONO
Non-POU domain containing octamer binding.
    
 
 0.506
IPO7
Importin 7.
    
 
 0.425
KPNB1
Karyopherin subunit beta 1.
    
 
 0.424
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.