STRINGSTRING
CHN1 protein (Latimeria chalumnae) - STRING interaction network
"CHN1" - Chimerin 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHN1Chimerin 1 (197 aa)    
Predicted Functional Partners:
MYO5C
Myosin VC (1752 aa)
     
  0.679
MYO5A
Myosin VA (heavy chain 12, myoxin) (1892 aa)
     
  0.679
ENSLACG00000022526
Uncharacterized protein (163 aa)
     
  0.651
RHOBTB2
Rho-related BTB domain containing 2 (734 aa)
     
  0.651
RAC3
Ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) (148 aa)
     
  0.651
RHOF
Ras homolog family member F (in filopodia) (187 aa)
     
  0.651
RHOA
Uncharacterized protein (156 aa)
     
  0.651
RHOJ
Ras homolog family member J (136 aa)
     
  0.651
RHOU
Ras homolog family member U (243 aa)
     
  0.651
ENSLACG00000016941
Ras homolog family member A (193 aa)
     
  0.651
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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