STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOXHD1Lipoxygenase homology domains 1. (2403 aa)    
Predicted Functional Partners:
SLC4A7
Anion exchange protein.
   
  
 0.475
AGBL1
ATP/GTP binding protein like 1.
     
 0.450
EML2
EMAP like 2.
 
  
  0.435
SLC26A5
Solute carrier family 26 member 5.
   
  
 0.424
SLC4A11
Solute carrier family 4 member 11.
      
 0.424
BCL3
BCL3 transcription coactivator.
    
 0.422
RNF165
Ring finger protein 165.
    
 
 0.421
TATDN3
TatD DNase domain containing 3.
      
 0.420
KANK4
KN motif and ankyrin repeat domains 4.
    
 0.413
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.413
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.