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LOXHD1 protein (Latimeria chalumnae) - STRING interaction network
"LOXHD1" - Lipoxygenase homology domains 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOXHD1Lipoxygenase homology domains 1 (2403 aa)    
Predicted Functional Partners:
SLC4A11
Solute carrier family 4, sodium borate transporter, member 11 (853 aa)
     
   
  0.598
IRF2BP2
Interferon regulatory factor 2 binding protein 2 (522 aa)
       
      0.581
HAUS1
HAUS augmin-like complex, subunit 1 (286 aa)
           
  0.574
ABHD12B
Abhydrolase domain containing 12B (367 aa)
           
  0.572
ENSLACG00000002487
Uncharacterized protein (1301 aa)
     
 
  0.560
TRPM2
Transient receptor potential cation channel, subfamily M, member 2 (1473 aa)
           
  0.487
MCOLN3
Mucolipin 3 (558 aa)
           
  0.479
MCOLN2
Mucolipin 2 (538 aa)
           
  0.479
MCOLN1
Mucolipin 1 (563 aa)
           
  0.479
ATPAF2
ATP synthase mitochondrial F1 complex assembly factor 2 (293 aa)
           
  0.457
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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