STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102363505Zgc:136461; Belongs to the peptidase S1 family. (227 aa)    
Predicted Functional Partners:
LOC102345227
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
0.715
LOC102356172
Zmp:0000001088; Belongs to the peptidase S1 family.
  
0.668
LOC102365271
Alpha-amylase.
   
  
 0.645
MMP9
Matrix metallopeptidase 9.
   
 0.643
GZMM
Granzyme M; Belongs to the peptidase S1 family.
  
0.586
APP
Amyloid beta precursor protein.
    
 0.584
GZMA
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
0.570
CPB1
Carboxypeptidase B1.
   
 
 0.568
GBA3
Glucosylceramidase beta 3 (gene/pseudogene); Belongs to the glycosyl hydrolase 1 family.
     
 0.568
LOC102346386
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
0.568
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.