STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZYQ5_LATCHCCHC-type domain-containing protein. (144 aa)    
Predicted Functional Partners:
APAF1
Apoptotic peptidase activating factor 1.
    
 0.790
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.724
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 0.686
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 0.686
H3B381_LATCH
Uncharacterized protein.
    
 0.566
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.566
CENPN
Centromere protein N.
   
  0.487
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.483
CENPQ
Uncharacterized protein.
   
  0.455
CENPM
Uncharacterized protein.
   
  0.451
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.