• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
SMPX protein (Latimeria chalumnae) - STRING interaction network
"SMPX" - Small muscle protein, X-linked in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMPXSmall muscle protein, X-linked (85 aa)    
Predicted Functional Partners:
TSPEAR
Uncharacterized protein; Thrombospondin-type laminin G domain and EAR repeats (426 aa)
           
  0.895
KLHL34
Kelch-like family member 34 (579 aa)
     
   
  0.833
GPSM2
G-protein signaling modulator 2 (663 aa)
           
  0.809
HSD17B4
Hydroxysteroid (17-beta) dehydrogenase 4 (740 aa)
           
  0.786
DNMT1
DNA (cytosine-5-)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family (1273 aa)
           
  0.777
MYOM2
Uncharacterized protein; Myomesin 2 (962 aa)
     
   
  0.761
MYOZ2
Myozenin 2a (273 aa)
     
   
  0.757
LDB3
LIM domain binding 3 (589 aa)
     
        0.746
MLIP
Muscular LMNA-interacting protein (1070 aa)
     
   
  0.729
TTN
Titin, tandem duplicate 2; Titin (21846 aa)
     
   
  0.728
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
Server load: low (7%) [HD]