STRINGSTRING
RSF1 protein (Latimeria chalumnae) - STRING interaction network
"RSF1" - Remodeling and spacing factor 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSF1Remodeling and spacing factor 1 (1432 aa)    
Predicted Functional Partners:
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 (1033 aa)
     
  0.776
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (1017 aa)
     
  0.776
CHD1L
Chromodomain helicase DNA binding protein 1-like (1017 aa)
     
  0.572
ENSLACG00000012915
Uncharacterized protein (429 aa)
         
  0.420
RBBP7
Retinoblastoma binding protein 7 (421 aa)
         
  0.420
MIS18BP1
MIS18 binding protein 1 (745 aa)
     
 
    0.416
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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