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GJA5 protein (Latimeria chalumnae) - STRING interaction network
"GJA5" - Gap junction protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GJA5Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell (371 aa)    
Predicted Functional Partners:
NKX2-5
NK2 homeobox 5; NK2 transcription factor related 5 (296 aa)
           
  0.823
HCN4
Hyperpolarization activated cyclic nucleotide-gated potassium channel 4 (1184 aa)
           
  0.799
TBX5
T-box 5 (522 aa)
     
   
  0.771
TBX3
T-box 3 (713 aa)
     
   
  0.766
KCNJ13
Potassium inwardly-rectifying channel, subfamily J, member 13 (366 aa)
       
 
  0.655
TBX18
T-box 18 (568 aa)
     
   
  0.635
BCL9
B-cell CLL/lymphoma 9 (1578 aa)
           
  0.630
ENSLACG00000004041
Tetraspanin; Zgc-100919 (250 aa)
       
 
  0.628
IGSF11
Immunoglobulin superfamily, member 11 (378 aa)
     
   
  0.627
PANX3
Pannexin 3; Belongs to the pannexin family (390 aa)
           
  0.626
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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