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DIMT1 protein (Latimeria chalumnae) - STRING interaction network
"DIMT1" - DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae) in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIMT1DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae) (306 aa)    
Predicted Functional Partners:
PNO1
Partner of NOB1 homolog (S. cerevisiae) (250 aa)
     
 
  0.985
WDR3
WD repeat domain 3 (944 aa)
     
      0.985
UTP15
UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae) (524 aa)
     
      0.972
KRR1
KRR1, small subunit (SSU) processome component, homolog (yeast); Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (379 aa)
     
 
  0.968
PWP2
PWP2 periodic tryptophan protein homolog (yeast) (873 aa)
     
      0.956
TSR1
TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) (820 aa)
     
 
  0.951
MRTO4
mRNA turnover 4 homolog (S. cerevisiae) (238 aa)
   
 
  0.950
RRP12
Ribosomal RNA processing 12 homolog (S. cerevisiae) (1121 aa)
     
 
  0.939
RIOK2
RIO kinase 2 (yeast) (542 aa)
     
 
  0.938
RPF1
Ribosome production factor 1 homolog (S. cerevisiae) (375 aa)
     
 
  0.936
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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