STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRIPAP1GRIP1 associated protein 1. (826 aa)    
Predicted Functional Partners:
CCZ1
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
    
 0.953
VPS41
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
    
 
 0.868
H3B2K8_LATCH
Uncharacterized protein.
    
 0.822
ARMC5
Armadillo repeat containing 5.
    
 0.737
RAB9B
RAB9B, member RAS oncogene family.
    
 0.737
GRIP1
Glutamate receptor interacting protein 1.
    
 
 0.721
RAB7B
RAB7B, member RAS oncogene family.
    
 0.717
LOC102352152
Uncharacterized protein.
    
 0.688
RAB7A
RAB7A, member RAS oncogene family.
    
 0.688
VPS39
VPS39 subunit of HOPS complex.
   
 
 0.625
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.