STRINGSTRING
SCD5 protein (Latimeria chalumnae) - STRING interaction network
"SCD5" - stearoyl-CoA desaturase 5 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCD5stearoyl-CoA desaturase 5 (279 aa)    
Predicted Functional Partners:
SCD
stearoyl-CoA desaturase (delta-9-desaturase) (342 aa)
   
   
 
0.802
ACACA
acetyl-CoA carboxylase alpha (2312 aa)
     
   
  0.793
ACACB
acetyl-CoA carboxylase beta (2311 aa)
     
   
  0.793
ELOVL2
ELOVL fatty acid elongase 2 (266 aa)
     
 
  0.754
ENSLACG00000005966
Fatty acid 2-hydroxylase ; Required for alpha-hydroxylation of free fatty acids and the formation of alpha-hydroxylated sphingolipids (370 aa)
     
 
  0.733
FA2H
Fatty acid 2-hydroxylase; Required for alpha-hydroxylation of free fatty acids and the formation of alpha-hydroxylated sphingolipids (363 aa)
     
 
  0.733
SYVN1
Synovial apoptosis inhibitor 1, synoviolin (587 aa)
     
 
  0.664
ACLY
ATP citrate lyase (978 aa)
     
   
  0.638
FASN
Fatty acid synthase (2502 aa)
     
   
  0.607
CYB5R4
Cytochrome b5 reductase 4 (519 aa)
     
 
  0.600
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (12%) [HD]