• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
SCD5 protein (Latimeria chalumnae) - STRING interaction network
"SCD5" - stearoyl-CoA desaturase 5 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCD5stearoyl-CoA desaturase 5; Belongs to the fatty acid desaturase type 1 family (279 aa)    
Predicted Functional Partners:
SCD
stearoyl-CoA desaturase (delta-9-desaturase); Belongs to the fatty acid desaturase type 1 family (342 aa)
   
   
 
0.802
FASN
Fatty acid synthase (2502 aa)
     
   
  0.767
ACACA
Uncharacterized protein; acetyl-CoA carboxylase alpha (2312 aa)
     
   
  0.725
ACACB
acetyl-CoA carboxylase beta (2311 aa)
     
   
  0.710
ENSLACG00000005966
Fatty acid 2-hydroxylase; Required for alpha-hydroxylation of free fatty acids and the formation of alpha-hydroxylated sphingolipids (370 aa)
     
 
  0.708
ENSLACG00000000778
Fatty acid 2-hydroxylase; Required for alpha-hydroxylation of free fatty acids and the formation of alpha-hydroxylated sphingolipids (363 aa)
     
 
  0.708
HSD17B12
Hydroxysteroid (17-beta) dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family (318 aa)
   
 
  0.667
SREBF1
Sterol regulatory element binding transcription factor 1 (1100 aa)
     
   
  0.657
ELOVL5
Elongation of very long chain fatty acids protein; ELOVL fatty acid elongase 5 (219 aa)
     
 
  0.624
CYB5B
Cytochrome b5 type B (outer mitochondrial membrane) (146 aa)
     
 
  0.598
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
Server load: low (7%) [HD]