STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZYV7_LATCHUncharacterized protein. (623 aa)    
Predicted Functional Partners:
MYO9B
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
0.604
MYO9B-2
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.604
MYO9A
Myosin IXA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
0.604
RHOV
Ras homolog family member V.
   
 0.560
PSTPIP1
Proline-serine-threonine phosphatase interacting protein 1.
   
 
 0.485
PSTPIP2
Proline-serine-threonine phosphatase interacting protein 2.
   
 
 0.472
CDC42
Cell division cycle 42.
   
 0.470
IQGAP1
IQ motif containing GTPase activating protein 1.
    
 0.426
LOC102351732
Uncharacterized protein.
   
 0.426
IQGAP2
IQ motif containing GTPase activating protein 2.
    
 0.426
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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