STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZYW4_LATCHANK_REP_REGION domain-containing protein. (149 aa)    
Predicted Functional Partners:
PPP6C
Serine/threonine-protein phosphatase.
    
 0.629
NFKBIB
NFKB inhibitor beta.
  
 
 0.530
RIPK4
Receptor interacting serine/threonine kinase 4.
  
  0.519
ASB2
Ankyrin repeat and SOCS box containing 2.
  
  0.501
CDKN2C
Cyclin dependent kinase inhibitor 2C.
  
 
   0.499
ASB1
Ankyrin repeat and SOCS box containing 1.
  
 
  0.495
RFXANK
Regulatory factor X associated ankyrin containing protein.
  
     0.478
BCL3
BCL3 transcription coactivator.
  
  
  0.477
ANKRD2
Ankyrin repeat domain 2.
  
     0.473
ANKRA2
Ankyrin repeat family A member 2.
  
     0.468
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.