STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102363544Uncharacterized protein. (1162 aa)    
Predicted Functional Partners:
CYP4V2
Cytochrome P450 family 4 subfamily V member 2; Belongs to the cytochrome P450 family.
   
 0.684
LOC102345465
Uncharacterized protein.
   
 0.663
H3AN32_LATCH
Uncharacterized protein.
   
 0.663
GBX2
Gastrulation brain homeobox 2.
      
 0.625
NEK2
NIMA related kinase 2.
   
  
 0.606
THBS2
Uncharacterized protein.
    
 0.582
WDR37
WD repeat domain 37.
   
 0.577
DCAF12
DDB1 and CUL4 associated factor 12.
      
 0.555
FBH1
F-box DNA helicase 1.
      
 0.555
PHACTR1
Phosphatase and actin regulator.
      
 0.543
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.