STRINGSTRING
SORD protein (Latimeria chalumnae) - STRING interaction network
"SORD" - Sorbitol dehydrogenase in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SORDSorbitol dehydrogenase (356 aa)    
Predicted Functional Partners:
AKR1E2
Aldo-keto reductase family 1, member E2 (316 aa)
   
  0.959
ENSLACG00000017769
Uncharacterized protein (320 aa)
   
  0.958
DCXR
dicarbonyl/L-xylulose reductase (244 aa)
   
 
  0.908
HK2
Hexokinase-2 (918 aa)
     
 
  0.906
HK1
Hexokinase 1 (919 aa)
     
 
  0.906
HKDC1
Hexokinase domain containing 1 (923 aa)
     
 
  0.906
KHK
Ketohexokinase (fructokinase) (343 aa)
     
 
  0.906
FUK
Fucokinase (956 aa)
         
    0.800
XYLB
Xylulokinase homolog (H. influenzae) (429 aa)
 
 
  0.798
CAT
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (521 aa)
   
  0.768
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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