STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102356101Uncharacterized protein. (213 aa)    
Predicted Functional Partners:
H3A535_LATCH
CHM Rab escort protein.
    
 0.892
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.854
ITSN2
Intersectin 2.
    
 0.844
PTAR1
Protein prenyltransferase alpha subunit repeat containing 1.
    
 0.752
H3AJ45_LATCH
Uncharacterized protein.
    
 0.734
ITSN1
Intersectin 1 (SH3 domain protein).
    
 0.734
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.702
COG3
Component of oligomeric golgi complex 3.
     
 0.696
RAB3IL1
RAB3A interacting protein like 1.
    
 0.689
COG5
Component of oligomeric golgi complex 5.
     
 0.687
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.