STRINGSTRING
SPEF2 protein (Latimeria chalumnae) - STRING interaction network
"SPEF2" - Sperm flagellar 2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPEF2Sperm flagellar 2 (1753 aa)    
Predicted Functional Partners:
SPAG17
Sperm associated antigen 17 (2197 aa)
     
   
  0.690
CCDC39
Coiled-coil domain containing 39 (945 aa)
     
   
  0.614
ADK
Adenosine kinase (302 aa)
           
  0.603
TMX1
Thioredoxin-related transmembrane protein 1 (297 aa)
           
  0.602
ENSLACG00000003722
Uncharacterized protein (225 aa)
     
   
  0.598
PACRG
PARK2 co-regulated (121 aa)
     
   
  0.529
CCDC40
Coiled-coil domain containing 40 (859 aa)
     
   
  0.524
RSPH4A
Radial spoke head 4 homolog A (Chlamydomonas) (464 aa)
     
   
  0.520
IFT81
Intraflagellar transport 81 homolog (Chlamydomonas) (680 aa)
     
   
  0.516
RSPH9
Radial spoke head 9 homolog (Chlamydomonas) (277 aa)
           
  0.504
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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