STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT10Synaptotagmin 10. (358 aa)    
Predicted Functional Partners:
PPFIA2
Uncharacterized protein.
   
 
 0.790
AFAP1L1
Actin filament associated protein 1 like 1.
      
 0.763
VPS53
VPS53 subunit of GARP complex.
   
  
 0.751
GEMIN4
Gem nuclear organelle associated protein 4.
      
 0.722
ITSN2
Intersectin 2.
     
 0.664
KCNC2
Ion_trans domain-containing protein; Belongs to the potassium channel family.
   
  
 0.612
PLK3
Polo like kinase 3.
      
 0.608
GYS2
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
      
 0.596
RIMS2
Regulating synaptic membrane exocytosis 2a.
     
 0.559
RIMS2-2
Regulating synaptic membrane exocytosis 2.
     
0.559
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.