STRINGSTRING
PSKH2 protein (Latimeria chalumnae) - STRING interaction network
"PSKH2" - Protein serine kinase H2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSKH2Protein serine kinase H2 (300 aa)    
Predicted Functional Partners:
RHBDL3
Rhomboid, veinlet-like 3 (Drosophila) (373 aa)
     
  0.798
CABP4
Calcium binding protein 4 (240 aa)
     
  0.762
EFCAB2
EF-hand calcium binding domain 2 (162 aa)
     
  0.761
ENSLACG00000013233
Uncharacterized protein (163 aa)
     
  0.761
CALML6
Calmodulin-like 6 (160 aa)
     
  0.761
ENSLACG00000018681
Uncharacterized protein (163 aa)
     
  0.761
ENSLACG00000018677
Uncharacterized protein (164 aa)
     
  0.761
TNNC1
Troponin C type 1 (slow) (164 aa)
     
  0.761
CABP1
Calcium binding protein 1 (217 aa)
     
  0.761
CALML4
Calmodulin-like 4 (165 aa)
     
  0.761
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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