STRINGSTRING
TNPO3 protein (Latimeria chalumnae) - STRING interaction network
"TNPO3" - Transportin 3 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNPO3Transportin 3 (771 aa)    
Predicted Functional Partners:
RAN
RAN, member RAS oncogene family; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (147 aa)
     
 
  0.957
TNPO2
Transportin 2 (895 aa)
     
 
  0.895
TNPO1
Transportin 1 (859 aa)
     
 
  0.895
SRSF9
Serine/arginine-rich splicing factor 9 (225 aa)
     
 
  0.891
SRSF1
Serine/arginine-rich splicing factor 1 (266 aa)
     
 
  0.891
ENSLACG00000017874
Uncharacterized protein (263 aa)
     
 
  0.890
SRSF4
Serine/arginine-rich splicing factor 4 (491 aa)
     
 
  0.890
SRSF6
Serine/arginine-rich splicing factor 6 (338 aa)
     
 
  0.890
SRSF5
Serine/arginine-rich splicing factor 5 (367 aa)
     
 
  0.889
PPIE
Peptidylprolyl isomerase E (cyclophilin E); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (302 aa)
     
 
  0.691
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (6%) [HD]