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FBXO40 protein (Latimeria chalumnae) - STRING interaction network
"FBXO40" - F-box protein 40 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO40F-box protein 40 (700 aa)    
Predicted Functional Partners:
CUL1
Cullin 1 (776 aa)
       
  0.607
SKP1
S-phase kinase-associated protein 1 (172 aa)
       
  0.606
ENSLACG00000006057
Uncharacterized protein (258 aa)
         
  0.555
FBXO2
F-box protein 2 (247 aa)
         
  0.555
NEDD4L
Neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase (876 aa)
         
  0.554
HECTD2
HECT domain containing E3 ubiquitin protein ligase 2 (690 aa)
         
  0.553
FBXL22
F-box and leucine-rich repeat protein 22 (226 aa)
     
 
    0.544
FBXO32
F-box protein 32 (353 aa)
     
 
    0.544
SMURF2
SMAD specific E3 ubiquitin protein ligase 2 (754 aa)
         
  0.490
SMURF1
SMAD specific E3 ubiquitin protein ligase 1 (632 aa)
         
  0.490
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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