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LTBP3 protein (Latimeria chalumnae) - STRING interaction network
"LTBP3" - Latent transforming growth factor beta binding protein 3 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTBP3Latent transforming growth factor beta binding protein 3 (815 aa)    
Predicted Functional Partners:
NEURL
Neuralized homolog (Drosophila) (568 aa)
       
  0.946
NEURL1B
Neuralized homolog 1B (Drosophila) (534 aa)
       
  0.946
ENSLACG00000003294
Neurogenic locus notch homolog protein 2 (1577 aa)
     
0.637
NOTCH1
Notch 1 (2494 aa)
     
0.637
ENSLACG00000012848
Uncharacterized protein (2519 aa)
     
0.637
NOTCH2
Notch 2 (2489 aa)
     
0.636
MIB1
Mindbomb E3 ubiquitin protein ligase 1 (989 aa)
     
  0.601
DLG5
Discs, large homolog 5 (Drosophila) (1821 aa)
       
 
  0.579
TGFB1
Transforming growth factor, beta 1 (401 aa)
     
  0.558
ENSLACG00000017213
Uncharacterized protein (414 aa)
     
  0.556
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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