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HSPG2 protein (Latimeria chalumnae) - STRING interaction network
"HSPG2" - Heparan sulfate proteoglycan 2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSPG2Heparan sulfate proteoglycan 2 (2595 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan 1 (dystrophin-associated glycoprotein 1) (900 aa)
     
  0.962
FGF2
Fibroblast growth factor 2 (basic) (155 aa)
       
  0.797
LRIT2
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 (1185 aa)
     
  0.784
LRIT3
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3 (651 aa)
     
  0.784
NID1
Nidogen 1 (792 aa)
     
  0.736
ENSLACG00000001234
Uncharacterized protein (446 aa)
     
  0.736
NID2
Nidogen 2 (osteonidogen) (1537 aa)
     
  0.706
GPC4
Glypican 4; Cell surface proteoglycan that bears heparan sulfate (433 aa)
     
 
  0.705
GPC6
Glypican 6; Cell surface proteoglycan that bears heparan sulfate (178 aa)
     
 
  0.705
GPC2
Glypican 2; Cell surface proteoglycan that bears heparan sulfate (477 aa)
     
 
  0.705
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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