STRINGSTRING
UBE4B protein (Latimeria chalumnae) - STRING interaction network
"UBE4B" - Ubiquitination factor E4B in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE4BUbiquitination factor E4B (1348 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12 (2023 aa)
     
  0.974
UBQLN4
Ubiquilin 4 (636 aa)
     
  0.969
UBQLN1
Uncharacterized protein (526 aa)
     
  0.969
SPATA5
Spermatogenesis associated 5 (795 aa)
     
 
  0.928
ENSLACG00000015950
Uncharacterized protein (697 aa)
     
 
  0.928
VCP
Valosin containing protein (801 aa)
     
 
  0.928
ENSLACG00000018268
Uncharacterized protein (384 aa)
     
  0.927
RAD23A
RAD23 homolog A (S. cerevisiae) (379 aa)
     
  0.927
RAD23B
RAD23 homolog B (S. cerevisiae) (412 aa)
     
  0.927
PLAA
Phospholipase A2-activating protein (470 aa)
     
 
  0.924
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (17%) [HD]