STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D2TBC1 domain family member 2. (954 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
  0.793
RAB7A
RAB7A, member RAS oncogene family.
    
 0.720
H3B2K8_LATCH
Uncharacterized protein.
    
 0.685
LOC102352152
Uncharacterized protein.
    
 0.656
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
    
 
 0.572
ARMC5
Armadillo repeat containing 5.
    
 0.555
RAB9B
RAB9B, member RAS oncogene family.
    
 0.555
CDC14B
Cell division cycle 14B.
    
 
 0.519
CDC14A
Uncharacterized protein.
    
 
 0.519
DUSP23
Dual specificity phosphatase 23.
    
 
 0.519
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.