Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAT3Uncharacterized protein. (3096 aa)    
Predicted Functional Partners:
FJX1
Four-jointed box kinase 1.
   
 
 0.867
DNAH7
Dynein axonemal heavy chain 7.
      
 0.674
LIX1
Limb and CNS expressed 1.
   
 0.672
LIX1L
Limb and CNS expressed 1 like.
   
 0.672
KMT2C
Lysine methyltransferase 2C.
     
 0.659
RBM27
RNA binding motif protein 27.
   
  
 0.579
ATN1
Atrophin 1.
    
 0.577
RERE
Arginine-glutamic acid dipeptide repeats.
    
 0.577
THUMPD2
Uncharacterized protein.
      
 0.569
DEK
SAP domain-containing protein.
      
 0.551
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.