Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CALHM3Calcium homeostasis modulator 3. (347 aa)    
Predicted Functional Partners:
TRPM5
Transient receptor potential cation channel subfamily M member 5.
      
 0.691
CALHM1
Calcium homeostasis modulator 1.
     
 0.640
KLHL29
Kelch like family member 29.
      
 0.580
PTPRE
Protein tyrosine phosphatase receptor type E.
      
 0.531
TAS1R3
Taste 1 receptor member 3.
      
 0.496
TAS1R1
Taste 1 receptor member 1.
      
 0.495
HAND2
Heart and neural crest derivatives expressed 2.
   
  
 0.475
PANX1
Pannexin; Structural component of the gap junctions and the hemichannels.
      
 0.472
VCL
Vinculin.
      
 0.468
HAND1
Heart and neural crest derivatives expressed 1.
   
  
 0.458
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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