STRINGSTRING
CALHM3 protein (Latimeria chalumnae) - STRING interaction network
"CALHM3" - Calcium homeostasis modulator 3 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALHM3Calcium homeostasis modulator 3 (347 aa)    
Predicted Functional Partners:
ANO7P1
Anoctamin 7 pseudogene 1 (843 aa)
           
  0.584
ENSLACG00000007248
Anoctamin (778 aa)
           
  0.584
ANO6
Anoctamin 6 (766 aa)
           
  0.584
ANO5
Anoctamin 5 (818 aa)
           
  0.529
MCTP1
Multiple C2 domains, transmembrane 1 (529 aa)
           
  0.495
ANO9
Anoctamin 9 (750 aa)
           
  0.418
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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