STRINGSTRING
SDSL protein (Latimeria chalumnae) - STRING interaction network
"SDSL" - Serine dehydratase-like in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDSLSerine dehydratase-like (325 aa)    
Predicted Functional Partners:
SHMT2
Serine hydroxymethyltransferase 2 (mitochondrial); Interconversion of serine and glycine (542 aa)
     
 
  0.921
SHMT1
Serine hydroxymethyltransferase 1 (soluble); Interconversion of serine and glycine (474 aa)
     
 
  0.921
SRR
Serine racemase (337 aa)
   
   
0.918
ENSLACG00000017532
Uncharacterized protein (417 aa)
     
 
  0.918
AGXT
Alanine-glyoxylate aminotransferase (426 aa)
   
  0.915
CBS
Cystathionine-beta-synthase (563 aa)
     
 
  0.912
PSPH
Phosphoserine phosphatase (248 aa)
     
 
  0.911
MTR
5-methyltetrahydrofolate-homocysteine methyltransferase (1252 aa)
     
 
  0.907
ENSLACG00000010318
Uncharacterized protein (371 aa)
     
 
  0.905
BCAT1
Branched chain amino-acid transaminase 1, cytosolic (385 aa)
   
 
  0.858
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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