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CARHSP1 protein (Latimeria chalumnae) - STRING interaction network
"CARHSP1" - Calcium regulated heat stable protein 1, 24kDa in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CARHSP1Calcium regulated heat stable protein 1, 24kDa (157 aa)    
Predicted Functional Partners:
KDM8
Lysine (K)-specific demethylase 8 (407 aa)
       
 
  0.838
PNPO
Pyridoxamine 5’-phosphate oxidase (257 aa)
         
  0.790
COPS7B
Uncharacterized protein; COP9 signalosome subunit 7B (177 aa)
           
  0.760
LRGUK
Leucine-rich repeats and guanylate kinase domain containing (595 aa)
     
 
  0.652
AZIN1
Uncharacterized protein (258 aa)
   
   
  0.649
SPTBN1
Spectrin, beta, non-erythrocytic 1; Belongs to the spectrin family (2278 aa)
       
 
  0.647
TRAPPC10
annotation not available (1258 aa)
           
  0.647
SEL1L3
SEL1L family member 3; Sel-1 suppressor of lin-12-like 3 (C. elegans) (1031 aa)
           
  0.647
C11orf73
Hikeshi, heat shock protein nuclear import factor; Chromosome 11 open reading frame 73 (229 aa)
           
  0.646
CHP1
Calcineurin-like EF hand protein 1 (195 aa)
           
  0.646
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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