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CARHSP1 protein (Latimeria chalumnae) - STRING interaction network
"CARHSP1" - Calcium regulated heat stable protein 1, 24kDa in Latimeria chalumnae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CARHSP1Calcium regulated heat stable protein 1, 24kDa (157 aa)    
Predicted Functional Partners:
DHX8
DEAH (Asp-Glu-Ala-His) box polypeptide 8 (1211 aa)
     
  0.789
PPIE
Peptidylprolyl isomerase E (cyclophilin E); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (302 aa)
   
  0.721
YTHDC2
YTH domain containing 2 (1429 aa)
     
  0.677
PNPO
Pyridoxamine 5’-phosphate oxidase (257 aa)
       
  0.642
GART
Phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase (1031 aa)
     
   
  0.604
ACLY
ATP citrate lyase (978 aa)
   
 
  0.583
TOP2A
Topoisomerase (DNA) II alpha 170kDa; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1569 aa)
   
 
  0.578
TOP2B
Topoisomerase (DNA) II beta 180kDa; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1615 aa)
   
 
  0.578
TDRD12
Tudor domain containing 12 (1104 aa)
   
  0.568
COPS7B
COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis) (177 aa)
     
   
  0.561
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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