STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CARHSP1Calcium regulated heat stable protein 1. (157 aa)    
Predicted Functional Partners:
DBNL
Drebrin like.
      
 0.700
POLR2F
RNA polymerase II subunit F.
   
 
 0.620
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
    
 0.615
RPS11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.614
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.613
RPS2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.600
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.593
H2ZZC6_LATCH
Sm domain-containing protein.
    
  0.584
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.578
SNRPG
Small nuclear ribonucleoprotein G.
    
  0.576
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.