STRINGSTRING
TNNI3 protein (Latimeria chalumnae) - STRING interaction network
"TNNI3" - Troponin I type 3 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNNI3Troponin I type 3 (cardiac) (240 aa)    
Predicted Functional Partners:
TNNT2
Troponin T type 2 (cardiac) (286 aa)
     
  0.989
ENSLACG00000018616
Troponin C type 1a (slow) (164 aa)
     
  0.983
TNNC1
annotation not available (161 aa)
     
  0.983
TPM2
Tropomyosin 2 (beta); Belongs to the tropomyosin family (284 aa)
     
  0.944
ACTC1
Actin, alpha, cardiac muscle 1; Belongs to the actin family (377 aa)
     
  0.911
TNNT3
Troponin T type 3 (skeletal, fast) (227 aa)
     
 
  0.894
ENSLACG00000003922
annotation not available (377 aa)
     
  0.864
TNNT1
Troponin T type 1 (skeletal, slow) (253 aa)
     
 
  0.854
MYH1
Uncharacterized protein (848 aa)
     
 
  0.852
PRKACB
Protein kinase, cAMP-dependent, catalytic, beta (351 aa)
     
 
  0.819
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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