STRINGSTRING
SDE2 protein (Latimeria chalumnae) - STRING interaction network
SDE2 telomere maintenance homolog (S. pombe) in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE2SDE2 telomere maintenance homolog (S. pombe) (418 aa)    
Predicted Functional Partners:
BUD31
BUD31 homolog (S. cerevisiae) (238 aa)
     
 
  0.931
PRPF19
PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) (504 aa)
     
      0.816
CDC40
Cell division cycle 40 homolog (S. cerevisiae) (574 aa)
       
      0.815
MARCO
Macrophage receptor with collagenous structure (444 aa)
           
  0.487
C18orf54
Chromosome 18 open reading frame 54 (547 aa)
           
  0.482
ERC1
ELKS/RAB6-interacting/CAST family member 1 (1134 aa)
           
  0.457
NPHS2
Nephrosis 2, idiopathic, steroid-resistant (podocin) (398 aa)
           
  0.456
CFP
Complement factor properdin (472 aa)
           
  0.439
AVPR2
Arginine vasopressin receptor 2 (365 aa)
           
  0.434
ENSLACG00000013474
Uncharacterized protein (370 aa)
           
  0.434
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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