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RASD1 protein (Latimeria chalumnae) - STRING interaction network
"RASD1" - RAS, dexamethasone-induced 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASD1RAS, dexamethasone-induced 1 (265 aa)    
Predicted Functional Partners:
MYO16
Myosin XVI (786 aa)
     
  0.852
LRRK1
Leucine-rich repeat kinase 1 (1987 aa)
   
  0.815
LRRK2
Leucine-rich repeat kinase 2 (2508 aa)
   
  0.815
PYGM
Phosphorylase, glycogen, muscle; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (1365 aa)
     
  0.802
TSC1
Tuberous sclerosis 1 (1217 aa)
       
  0.761
RAPGEF1
Rap guanine nucleotide exchange factor (GEF) 1 (1217 aa)
     
  0.761
ENSLACG00000009984
Uncharacterized protein (401 aa)
     
  0.761
SOS2
Son of sevenless homolog 2 (Drosophila) (1241 aa)
     
  0.761
SOS1
Son of sevenless homolog 1 (Drosophila) (1331 aa)
     
  0.761
RALGPS1
Ral GEF with PH domain and SH3 binding motif 1 (229 aa)
     
  0.761
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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