STRINGSTRING
SMO protein (Latimeria chalumnae) - STRING interaction network
"SMO" - Smoothened, frizzled family receptor in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMOSmoothened, frizzled family receptor (820 aa)    
Predicted Functional Partners:
PTCH2
Patched 2 (1134 aa)
     
  0.983
PTCH1
Patched 1 (1287 aa)
     
  0.983
EVC
Ellis van Creveld syndrome (814 aa)
     
 
    0.904
CSNK1A1
Uncharacterized protein (287 aa)
     
  0.898
ARR3
Arrestin 3, retinal (X-arrestin) (427 aa)
     
  0.896
ARRB1
Arrestin, beta 1 (394 aa)
     
  0.896
ARRB2
Arrestin, beta 2 (413 aa)
     
  0.896
CSNK1D
Casein kinase 1, delta (417 aa)
     
  0.893
CSNK1E
Casein kinase 1, epsilon (418 aa)
     
  0.893
ADRBK2
Beta-adrenergic receptor kinase 2 (616 aa)
     
 
  0.880
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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