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COPS5 protein (Latimeria chalumnae) - STRING interaction network
"COPS5" - COP9 constitutive photomorphogenic homolog subunit 5 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COPS5COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis) (334 aa)    
Predicted Functional Partners:
COPS4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) (422 aa)
     
  0.994
COPS2
COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) (443 aa)
     
  0.991
COPS6
COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis) (248 aa)
     
  0.988
GPS1
G protein pathway suppressor 1 (566 aa)
     
  0.987
COPS3
COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis) (423 aa)
     
  0.985
COPS7B
COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis) (177 aa)
     
  0.983
COPS8
COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis) (217 aa)
     
  0.965
CUL4B
Cullin 4B (845 aa)
     
  0.955
CUL4A
Cullin 4A (851 aa)
     
  0.955
CUL1
Cullin 1 (776 aa)
     
  0.954
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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