STRINGSTRING
IST1 protein (Latimeria chalumnae) - STRING interaction network
IST1, ESCRT-III associated factor in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IST1IST1, ESCRT-III associated factor; Increased sodium tolerance 1 homolog (yeast) (260 aa)    
Predicted Functional Partners:
CHMP1B
Charged multivesicular body protein 1B; Belongs to the SNF7 family (161 aa)
     
 
  0.979
CHMP1A
Charged multivesicular body protein 1A (206 aa)
     
 
  0.963
VPS4A
annotation not available (437 aa)
     
 
  0.914
VPS4B
Vacuolar protein sorting 4 homolog B (S. cerevisiae); Belongs to the AAA ATPase family (448 aa)
     
 
  0.914
ULK3
Uncharacterized protein; Unc-51 like kinase 3; Belongs to the protein kinase superfamily (471 aa)
       
 
  0.914
VTA1
Uncharacterized protein; Vesicle (multivesicular body) trafficking 1 (43 aa)
     
 
  0.913
CHMP5
Charged multivesicular body protein 5; Belongs to the SNF7 family (220 aa)
     
 
  0.905
CHMP2A
Charged multivesicular body protein 2A; Belongs to the SNF7 family (295 aa)
     
 
  0.905
CHMP3
Charged multivesicular body protein 3; Belongs to the SNF7 family (220 aa)
     
 
  0.893
CHMP4B
Charged multivesicular body protein 4B; Belongs to the SNF7 family (225 aa)
     
 
  0.891
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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