STRINGSTRING
IST1 protein (Latimeria chalumnae) - STRING interaction network
"IST1" - Increased sodium tolerance 1 homolog in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IST1Increased sodium tolerance 1 homolog (yeast) (260 aa)    
Predicted Functional Partners:
CHMP1A
Charged multivesicular body protein 1A (206 aa)
     
 
  0.948
CHMP1B
Charged multivesicular body protein 1B (161 aa)
     
 
  0.948
CHMP5
Charged multivesicular body protein 5 (220 aa)
     
 
  0.900
VPS4A
Vacuolar protein sorting 4 homolog A (S. cerevisiae) (437 aa)
     
 
  0.894
VPS4B
Vacuolar protein sorting 4 homolog B (S. cerevisiae) (448 aa)
     
 
  0.894
CHMP2A
Charged multivesicular body protein 2A (295 aa)
     
 
  0.824
CHMP3
Charged multivesicular body protein 3 (220 aa)
     
 
  0.794
EIF2B2
Eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa (400 aa)
       
      0.787
EIF2B4
Eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa (533 aa)
       
      0.787
CHMP4C
Charged multivesicular body protein 4C (240 aa)
     
 
  0.740
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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