STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FCHSD2Uncharacterized protein. (532 aa)    
Predicted Functional Partners:
LOC102347758
F-BAR domain-containing protein.
 
     0.931
ITSN2
Intersectin 2.
   
0.852
H3AJ45_LATCH
Uncharacterized protein.
   
 0.842
ITSN1
Intersectin 1 (SH3 domain protein).
   
0.842
PDZD7
PDZ domain containing 7.
    
  0.813
GDPD5
Glycerophosphodiester phosphodiesterase domain containing 5.
      
 0.691
TSKU
Tsukushi, small leucine rich proteoglycan.
     
 0.686
P2RY2
Purinergic receptor P2Y2; Belongs to the G-protein coupled receptor 1 family.
      
 0.683
GAS7
Growth arrest specific 7.
    
 0.644
RPS3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
 
    
 0.638
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.