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FCHSD2 protein (Latimeria chalumnae) - STRING interaction network
"FCHSD2" - FCH and double SH3 domains 2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FCHSD2FCH and double SH3 domains 2 (532 aa)    
Predicted Functional Partners:
ENSLACG00000008523
Intersectin 1 (SH3 domain protein) (651 aa)
       
 
  0.866
ITSN2
Intersectin 2a (1704 aa)
       
 
0.825
ITSN1
Intersectin 1 (SH3 domain protein) (1175 aa)
       
 
0.824
TRIM45
Tripartite motif containing 45 (584 aa)
       
 
  0.794
UBOX5
U-box domain containing 5 (530 aa)
     
   
  0.774
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor (663 aa)
           
  0.774
LONP2
Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import (855 aa)
     
   
  0.773
STAC
SH3 and cysteine rich domain (279 aa)
     
   
  0.768
RELT
RELT, TNF receptor; RELT tumor necrosis factor receptor (432 aa)
     
   
  0.687
LRIF1
Uncharacterized protein; Ligand dependent nuclear receptor interacting factor 1 (783 aa)
           
  0.675
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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